src.core.analyzer package ========================= Submodules ---------- src.core.analyzer.adapter\_trimmer module ----------------------------------------- .. automodule:: src.core.analyzer.adapter_trimmer :members: :show-inheritance: :undoc-members: src.core.analyzer.amplicon\_coverage\_computer module ----------------------------------------------------- .. automodule:: src.core.analyzer.amplicon_coverage_computer :members: :show-inheritance: :undoc-members: src.core.analyzer.annotation\_adapter module -------------------------------------------- .. automodule:: src.core.analyzer.annotation_adapter :members: :show-inheritance: :undoc-members: src.core.analyzer.bam\_grouper module ------------------------------------- .. automodule:: src.core.analyzer.bam_grouper :members: :show-inheritance: :undoc-members: src.core.analyzer.bqsr\_performer module ---------------------------------------- .. automodule:: src.core.analyzer.bqsr_performer :members: :show-inheritance: :undoc-members: src.core.analyzer.i\_data\_preparator module -------------------------------------------- .. automodule:: src.core.analyzer.i_data_preparator :members: :show-inheritance: :undoc-members: src.core.analyzer.i\_variant\_caller module ------------------------------------------- .. automodule:: src.core.analyzer.i_variant_caller :members: :show-inheritance: :undoc-members: src.core.analyzer.primer\_cutter module --------------------------------------- .. automodule:: src.core.analyzer.primer_cutter :members: :show-inheritance: :undoc-members: src.core.analyzer.sequence\_aligner module ------------------------------------------ .. automodule:: src.core.analyzer.sequence_aligner :members: :show-inheritance: :undoc-members: src.core.analyzer.variant\_caller module ---------------------------------------- .. automodule:: src.core.analyzer.variant_caller :members: :show-inheritance: :undoc-members: src.core.analyzer.variant\_caller\_factory module ------------------------------------------------- .. automodule:: src.core.analyzer.variant_caller_factory :members: :show-inheritance: :undoc-members: Module contents --------------- .. automodule:: src.core.analyzer :members: :show-inheritance: :undoc-members: